{
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  "Package": "ccdR",
  "Title": "Utilities for Interacting with the 'CTX' APIs",
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  "Authors@R": "c(\nperson(\"Paul\", \"Kruse\", email = \"kruse.paul@epa.gov\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-5516-9717\")),\nperson(\"Caroline\", \"Ring\", email = \"ring.caroline@epa.gov\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-0463-1251\")),\nperson(\"Madison\", \"Feshuk\", role = \"ctb\",\nemail = \"feshuk.madison@epa.gov\",\ncomment = c(ORCID = \"0000-0002-1390-6405\")),\nperson(\"Carter\", \"Thunes\", role = \"ctb\",\nemail = \"thunes.carter@epa.gov\"),\nperson(\"Jason\", \"Brown\", role = \"ctb\",\nemail = \"brown.jason@epa.gov\")\n)",
  "Description": "Access chemical, hazard, bioactivity, and exposure data\nfrom the Computational Toxicology and Exposure ('CTX') APIs\n<https://api-ccte.epa.gov/docs/>. 'ccdR' was developed to\nstreamline the process of accessing the information available\nthrough the 'CTX' APIs without requiring prior knowledge of how\nto use APIs. Most data is also available on the CompTox\nChemical Dashboard ('CCD') <https://comptox.epa.gov/dashboard/>\nand other resources found at the EPA Computational Toxicology\nand Exposure Online Resources\n<https://www.epa.gov/comptox-tools>.",
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  "Repository": "https://usepa.r-universe.dev",
  "Date/Publication": "2024-07-09 13:17:56 UTC",
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  "Author": "Paul Kruse [aut, cre] (ORCID: <https://orcid.org/0000-0001-5516-9717>),\nCaroline Ring [aut] (ORCID: <https://orcid.org/0000-0002-0463-1251>),\nMadison Feshuk [ctb] (ORCID: <https://orcid.org/0000-0002-1390-6405>),\nCarter Thunes [ctb],\nJason Brown [ctb]",
  "Maintainer": "Paul Kruse <kruse.paul@epa.gov>",
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  "_created": "2026-06-02T07:55:50.000Z",
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    "extra/citation.html",
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    "extra/contents.json",
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      "date": "2024-03-29"
    },
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  ],
  "_exports": [
    "ccdr_hide_api_key",
    "ccdr_show_api_key",
    "chemical_contains",
    "chemical_contains_batch",
    "chemical_equal",
    "chemical_equal_batch",
    "chemical_starts_with",
    "chemical_starts_with_batch",
    "ctx_key",
    "get_all_assays",
    "get_all_public_chemical_lists",
    "get_annotation_by_aeid",
    "get_annotation_by_aeid_batch",
    "get_bioactivity_details",
    "get_bioactivity_details_batch",
    "get_bioactivity_endpoint_status",
    "get_bioactivity_summary",
    "get_bioactivity_summary_batch",
    "get_cancer_hazard",
    "get_cancer_hazard_batch",
    "get_chem_info",
    "get_chem_info_batch",
    "get_chemical_by_property_range",
    "get_chemical_by_property_range_batch",
    "get_chemical_details",
    "get_chemical_details_batch",
    "get_chemical_endpoint_status",
    "get_chemical_image",
    "get_chemical_image_batch",
    "get_chemical_lists_by_type",
    "get_chemical_lists_by_type_batch",
    "get_chemical_mol",
    "get_chemical_mol_batch",
    "get_chemical_mrv",
    "get_chemical_mrv_batch",
    "get_chemical_synonym",
    "get_chemical_synonym_batch",
    "get_chemicals_in_list",
    "get_chemicals_in_list_batch",
    "get_ecotox_hazard_by_dtxsid",
    "get_ecotox_hazard_by_dtxsid_batch",
    "get_exposure_endpoint_status",
    "get_exposure_functional_use",
    "get_exposure_functional_use_batch",
    "get_exposure_functional_use_category",
    "get_exposure_functional_use_probability",
    "get_exposure_functional_use_probability_batch",
    "get_exposure_list_presence_tags",
    "get_exposure_list_presence_tags_by_dtxsid",
    "get_exposure_list_presence_tags_by_dtxsid_batch",
    "get_exposure_product_data",
    "get_exposure_product_data_batch",
    "get_exposure_product_data_puc",
    "get_fate_by_dtxsid",
    "get_fate_by_dtxsid_batch",
    "get_genetox_details",
    "get_genetox_details_batch",
    "get_genetox_summary",
    "get_genetox_summary_batch",
    "get_hazard_by_dtxsid",
    "get_hazard_by_dtxsid_batch",
    "get_hazard_endpoint_status",
    "get_human_hazard_by_dtxsid",
    "get_human_hazard_by_dtxsid_batch",
    "get_inchi",
    "get_inchikey",
    "get_lists_containing_chemical",
    "get_lists_containing_chemical_batch",
    "get_msready_by_dtxcid",
    "get_msready_by_dtxcid_batch",
    "get_msready_by_formula",
    "get_msready_by_formula_batch",
    "get_msready_by_mass",
    "get_msready_by_mass_batch",
    "get_msready_by_mass_with_error_batch",
    "get_public_chemical_list_by_name",
    "get_public_chemical_list_by_name_batch",
    "get_skin_eye_hazard",
    "get_skin_eye_hazard_batch",
    "get_smiles",
    "has_ccdr_option",
    "has_ccdr_options",
    "has_ctx_key",
    "register_ccdr",
    "set_ccdr_option",
    "showing_key"
  ],
  "_datasets": [
    {
      "name": "bioactivity_api_server",
      "title": "Bioactivity API Server url",
      "object": "bioactivity_api_server",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "chemical_api_server",
      "title": "Chemical API Server url",
      "object": "chemical_api_server",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "exposure_api_server",
      "title": "Exposure API Server url",
      "object": "exposure_api_server",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "hazard_api_server",
      "title": "Hazard API Server url",
      "object": "hazard_api_server",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "bioactivity_api_server",
      "title": "Bioactivity API Server url",
      "topics": [
        "bioactivity_api_server"
      ]
    },
    {
      "page": "ccdr_options",
      "title": "ccdr Options",
      "topics": [
        "ccdr_options",
        "has_ccdr_option",
        "has_ccdr_options",
        "set_ccdr_option"
      ]
    },
    {
      "page": "chemical_api_server",
      "title": "Chemical API Server url",
      "topics": [
        "chemical_api_server"
      ]
    },
    {
      "page": "chemical_contains",
      "title": "Chemical contains",
      "topics": [
        "chemical_contains"
      ]
    },
    {
      "page": "chemical_contains_batch",
      "title": "Chemical contains batch search",
      "topics": [
        "chemical_contains_batch"
      ]
    },
    {
      "page": "chemical_equal",
      "title": "Chemical equal",
      "topics": [
        "chemical_equal"
      ]
    },
    {
      "page": "chemical_equal_batch",
      "title": "Chemical equal batch search",
      "topics": [
        "chemical_equal_batch"
      ]
    },
    {
      "page": "chemical_starts_with",
      "title": "Chemical starts with",
      "topics": [
        "chemical_starts_with"
      ]
    },
    {
      "page": "chemical_starts_with_batch",
      "title": "Chemical starts with batch search",
      "topics": [
        "chemical_starts_with_batch"
      ]
    },
    {
      "page": "create_data.table_chemical_details",
      "title": "Create chemical details data.table helper function",
      "topics": [
        "create_data.table_chemical_details"
      ]
    },
    {
      "page": "exposure_api_server",
      "title": "Exposure API Server url",
      "topics": [
        "exposure_api_server"
      ]
    },
    {
      "page": "get_all_assays",
      "title": "Retrieve all assays",
      "topics": [
        "get_all_assays"
      ]
    },
    {
      "page": "get_all_public_chemical_lists",
      "title": "Get all public chemical lists",
      "topics": [
        "get_all_public_chemical_lists"
      ]
    },
    {
      "page": "get_annotation_by_aeid",
      "title": "Retrieve annotations for AEID",
      "topics": [
        "get_annotation_by_aeid"
      ]
    },
    {
      "page": "get_annotation_by_aeid_batch",
      "title": "Retrieve annotations for AEID batch",
      "topics": [
        "get_annotation_by_aeid_batch"
      ]
    },
    {
      "page": "get_bioactivity_details",
      "title": "Retrieve bioactivity data from DTXSID, AEID, SPID, or m4id",
      "topics": [
        "get_bioactivity_details"
      ]
    },
    {
      "page": "get_bioactivity_details_batch",
      "title": "Retrieve bioactivity data from DTXSID or AEID batch",
      "topics": [
        "get_bioactivity_details_batch"
      ]
    },
    {
      "page": "get_bioactivity_endpoint_status",
      "title": "Bioactivity API Endpoint status",
      "topics": [
        "get_bioactivity_endpoint_status"
      ]
    },
    {
      "page": "get_bioactivity_summary",
      "title": "Retrieve bioactivity summary for AEID",
      "topics": [
        "get_bioactivity_summary"
      ]
    },
    {
      "page": "get_bioactivity_summary_batch",
      "title": "Retrieve bioactivity summary data from AEID batch",
      "topics": [
        "get_bioactivity_summary_batch"
      ]
    },
    {
      "page": "get_cancer_hazard",
      "title": "Get cancer hazard",
      "topics": [
        "get_cancer_hazard"
      ]
    },
    {
      "page": "get_cancer_hazard_batch",
      "title": "Get cancer hazard batch",
      "topics": [
        "get_cancer_hazard_batch"
      ]
    },
    {
      "page": "get_cancer_hazard_batch_old",
      "title": "Get cancer hazard batch",
      "topics": [
        "get_cancer_hazard_batch_old"
      ]
    },
    {
      "page": "get_chem_info",
      "title": "Retrieve chemical information",
      "topics": [
        "get_chem_info"
      ]
    },
    {
      "page": "get_chem_info_batch",
      "title": "Retrieve chemical information in batch search",
      "topics": [
        "get_chem_info_batch"
      ]
    },
    {
      "page": "get_chem_info_batch_old",
      "title": "Retrieve chemical information in batch search",
      "topics": [
        "get_chem_info_batch_old"
      ]
    },
    {
      "page": "get_chemical_by_property_range",
      "title": "Get chemicals by property and its value range",
      "topics": [
        "get_chemical_by_property_range"
      ]
    },
    {
      "page": "get_chemical_by_property_range_batch",
      "title": "Retrieve chemicals by property and value range in batch search",
      "topics": [
        "get_chemical_by_property_range_batch"
      ]
    },
    {
      "page": "get_chemical_details",
      "title": "Retrieve chemical details from DTXSID of DTXCID",
      "topics": [
        "get_chemical_details"
      ]
    },
    {
      "page": "get_chemical_details_batch",
      "title": "Retrieve chemical details from DTXSID of DTXCID in batch search",
      "topics": [
        "get_chemical_details_batch"
      ]
    },
    {
      "page": "get_chemical_endpoint_status",
      "title": "Chemical API Endpoint status",
      "topics": [
        "get_chemical_endpoint_status"
      ]
    },
    {
      "page": "get_chemical_image",
      "title": "Get image file by DTXSID or DTXCID",
      "topics": [
        "get_chemical_image"
      ]
    },
    {
      "page": "get_chemical_image_batch",
      "title": "Get image file by DTXSID or DTXCID batch",
      "topics": [
        "get_chemical_image_batch"
      ]
    },
    {
      "page": "get_chemical_lists_by_type",
      "title": "Get chemical lists by type",
      "topics": [
        "get_chemical_lists_by_type"
      ]
    },
    {
      "page": "get_chemical_lists_by_type_batch",
      "title": "Get chemical lists by type batch search",
      "topics": [
        "get_chemical_lists_by_type_batch"
      ]
    },
    {
      "page": "get_chemical_mol",
      "title": "Get mol file by DTXSID or DTXCID",
      "topics": [
        "get_chemical_mol"
      ]
    },
    {
      "page": "get_chemical_mol_batch",
      "title": "Get mol file by DTXSID or DTXCID batch",
      "topics": [
        "get_chemical_mol_batch"
      ]
    },
    {
      "page": "get_chemical_mrv",
      "title": "Get mrv file by DTXSID or DTXCID",
      "topics": [
        "get_chemical_mrv"
      ]
    },
    {
      "page": "get_chemical_mrv_batch",
      "title": "Ger mrv file by DTXSID or DTXCID batch",
      "topics": [
        "get_chemical_mrv_batch"
      ]
    },
    {
      "page": "get_chemical_synonym",
      "title": "Get chemical synonym",
      "topics": [
        "get_chemical_synonym"
      ]
    },
    {
      "page": "get_chemical_synonym_batch",
      "title": "Get chemical synonym batch",
      "topics": [
        "get_chemical_synonym_batch"
      ]
    },
    {
      "page": "get_chemicals_in_list",
      "title": "Get chemicals in a given chemical list",
      "topics": [
        "get_chemicals_in_list"
      ]
    },
    {
      "page": "get_chemicals_in_list_batch",
      "title": "Get chemicals in a given chemical list batch",
      "topics": [
        "get_chemicals_in_list_batch"
      ]
    },
    {
      "page": "get_ecotox_hazard_by_dtxsid",
      "title": "Get ecotox hazard data by DTXSID",
      "topics": [
        "get_ecotox_hazard_by_dtxsid"
      ]
    },
    {
      "page": "get_ecotox_hazard_by_dtxsid_batch",
      "title": "Get ecotox hazard data by DTXSID batch",
      "topics": [
        "get_ecotox_hazard_by_dtxsid_batch"
      ]
    },
    {
      "page": "get_ecotox_hazard_by_dtxsid_batch_old",
      "title": "Get ecotox hazard data by DTXSID batch",
      "topics": [
        "get_ecotox_hazard_by_dtxsid_batch_old"
      ]
    },
    {
      "page": "get_exposure_endpoint_status",
      "title": "Exposure API Endpoint status",
      "topics": [
        "get_exposure_endpoint_status"
      ]
    },
    {
      "page": "get_exposure_functional_use",
      "title": "Retrieve exposure related functional use data",
      "topics": [
        "get_exposure_functional_use"
      ]
    },
    {
      "page": "get_exposure_functional_use_batch",
      "title": "Retrieve exposure related functional use data batch",
      "topics": [
        "get_exposure_functional_use_batch"
      ]
    },
    {
      "page": "get_exposure_functional_use_category",
      "title": "Retrieve functional use categories",
      "topics": [
        "get_exposure_functional_use_category"
      ]
    },
    {
      "page": "get_exposure_functional_use_probability",
      "title": "Retrieve probability of exposure for functional use category",
      "topics": [
        "get_exposure_functional_use_probability"
      ]
    },
    {
      "page": "get_exposure_functional_use_probability_batch",
      "title": "Retrieve exposure functional use probability data batch",
      "topics": [
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      ]
    },
    {
      "page": "get_exposure_list_presence_tags",
      "title": "Retrieve list presence tags",
      "topics": [
        "get_exposure_list_presence_tags"
      ]
    },
    {
      "page": "get_exposure_list_presence_tags_by_dtxsid",
      "title": "Retrieve document data and list presence tags for a chemical",
      "topics": [
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      ]
    },
    {
      "page": "get_exposure_list_presence_tags_by_dtxsid_batch",
      "title": "Retrieve document data and list presence tags for chemicals batch",
      "topics": [
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    },
    {
      "page": "get_exposure_product_data",
      "title": "Retrieve product data for exposure purposes",
      "topics": [
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    },
    {
      "page": "get_exposure_product_data_batch",
      "title": "Retrieve product data for exposure purposes batch",
      "topics": [
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    },
    {
      "page": "get_exposure_product_data_puc",
      "title": "Retrieve product use categories related to exposure",
      "topics": [
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    {
      "page": "get_fate_by_dtxsid",
      "title": "Get fate by DTXSID",
      "topics": [
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    {
      "page": "get_fate_by_dtxsid_batch",
      "title": "Retrieve chemical fate data in batch search",
      "topics": [
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    },
    {
      "page": "get_fate_by_dtxsid_batch_old",
      "title": "Retrieve chemical fate data in batch search",
      "topics": [
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      "page": "get_genetox_details",
      "title": "Get genetox details",
      "topics": [
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    },
    {
      "page": "get_genetox_details_batch",
      "title": "Get genetox details batch",
      "topics": [
        "get_genetox_details_batch"
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    },
    {
      "page": "get_genetox_details_batch_old",
      "title": "Get genetox details batch",
      "topics": [
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    },
    {
      "page": "get_genetox_summary",
      "title": "Get genetox summary",
      "topics": [
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    },
    {
      "page": "get_genetox_summary_batch",
      "title": "Get genetox summary batch",
      "topics": [
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    {
      "page": "get_genetox_summary_batch_old",
      "title": "Get genetox summary batch",
      "topics": [
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      "page": "get_hazard_by_dtxsid",
      "title": "Get hazard data by DTXSID",
      "topics": [
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    {
      "page": "get_hazard_by_dtxsid_batch",
      "title": "Get hazard data by DTXSID batch",
      "topics": [
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    {
      "page": "get_hazard_by_dtxsid_batch_old",
      "title": "Get hazard data by DTXSID batch",
      "topics": [
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    },
    {
      "page": "get_hazard_endpoint_status",
      "title": "Hazard API Endpoint status",
      "topics": [
        "get_hazard_endpoint_status"
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    },
    {
      "page": "get_human_hazard_by_dtxsid",
      "title": "Get human hazard data by DTXSID",
      "topics": [
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    },
    {
      "page": "get_human_hazard_by_dtxsid_batch",
      "title": "Get human hazard data by DTXSID batch",
      "topics": [
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    {
      "page": "get_human_hazard_by_dtxsid_batch_old",
      "title": "Get human hazard data by DTXSID batch",
      "topics": [
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    {
      "page": "get_inchi",
      "title": "Get InChI",
      "topics": [
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    },
    {
      "page": "get_inchikey",
      "title": "Get InChIKey",
      "topics": [
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    },
    {
      "page": "get_lists_containing_chemical",
      "title": "Get chemical lists containing given chemical",
      "topics": [
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      "topics": [
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